Insertion junction: CLIP2.075174_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075174
Chromosome:chromosome 11
Location:2577949
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095090 (1 of 25) IPR013216//IPR029063 - Methyltransferase type 11 // S-adenosyl-L-methionine-dependent methyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTGTGGGAGCTGTGGGCTGGCGTGGGCGGTATAACTGTGCCCTGGT
Internal bar code:CCATTCTTTCGGGCGCAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2228
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGATACCGTACTGCGC
Suggested primer 2:GCAATATGACTTGGCCGCAG