Insertion junction: CLIP2.075176_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075176
Chromosome:chromosome 11
Location:1775038
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467900 (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTAGTTCATTGCCCATCCGCTTTAACCCACATTAACCCATGTTAAA
Internal bar code:TCACGTCATTCCCATCAGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:603
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTAGACGGTGTATGACG
Suggested primer 2:ACAGAGGCATGGACTGTGTG