Insertion junction: CLIP2.075176_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075176
Chromosome:chromosome 11
Location:1775039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467900 (1 of 10) PF13578 - Methyltransferase domain (Methyltransf_24) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGAGGTTGGCACGGCCCCGCGACGCGTGTCTGCGGGTGCTGTTGGA
Internal bar code:TCACGTCATTCCCATCAGTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1362
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGAGGCATGGACTGTGTG
Suggested primer 2:CGGGTAGACGGTGTATGACG