Insertion junction: CLIP2.075181_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075181
Chromosome:chromosome 15
Location:2970929
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre15.g643550 PDX1 Pyridoxin biosynthesis protein; (1 of 1) K06215 - pyridoxal 5'-phosphate synthase pdxS subunit (pdxS, pdx1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTTTTCCTGCCAAACGCCCACGGTATCGACCCTTTCCCCTTGTGTTC
Internal bar code:GCCGAACCGTTACCGCTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACACACACACACACACA
Suggested primer 2:GGTGTGTGTGTGTGTGTGTG