Insertion junction: CLIP2.075183_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075183
Chromosome:chromosome 16
Location:6251439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676400 HEL63 (1 of 1) K12811 - ATP-dependent RNA helicase DDX46/PRP5 (DDX46, PRP5); DEAD/DEAH box helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGTTGACGTGACTCTTGCGGGTTAACGAAAGCTCGTCGAACAAGTT
Internal bar code:TTGTACAATGGCTCAACAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:407
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACGGTCGTGGTCTTTC
Suggested primer 2:GGCGCAATAGTTCAGGGTCT