Insertion junction: CLIP2.075184_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075184
Chromosome:chromosome 5
Location:1972080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTAGAGACGTGGCTTGGACCACTTTTCCCTTGCGAGGCAAAACCAC
Internal bar code:TGTGGTGGGGATTTGTGTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1980
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGCTTGGTGAATGTGGTA
Suggested primer 2:CGCGCACTACGTTACACATG