Insertion junction: CLIP2.075190_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075190
Chromosome:chromosome 17
Location:5854958
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741550 (1 of 1) PTHR12072//PTHR12072:SF5 - CWF19, CELL CYCLE CONTROL PROTEIN // CWF19-LIKE PROTEIN 2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATTTAGGGCGCCTGCGTAGATGCATGCAATGACTTAGCGCGCTCAAC
Internal bar code:TTGATTCGAGGGGTTGACTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1128
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATCCTCGCGCTGAATTG
Suggested primer 2:AATCCGAACGTAACCACCCC