Insertion junction: CLIP2.075193_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075193
Chromosome:chromosome 3
Location:8479308
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g212081 (1 of 3) IPR013328 - 6-phosphogluconate dehydrogenase, domain 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGAGCCGTGCATCTAGCCGGCTGAAGAAGGTGGTTTGGTCCGGGACA
Internal bar code:AACGATTAGTGAAGTTTATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCAAAACCCCCACACAT
Suggested primer 2:GAATTCGTTCCTGGCATCGC