Insertion junction: CLIP2.075204_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075204
Chromosome:chromosome 10
Location:1476828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428500 PHX14,P4H2,PFH2 (1 of 14) K00472 - prolyl 4-hydroxylase (E1.14.11.2); Prolyl 4-hydroxylase 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGGTCGGACTGTCCCTTCTTGTAATGTCGCATTCATAGATAAGGC
Internal bar code:ATCTCACCCGTATGAATTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1683
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAATGGGGGCAACGGAT
Suggested primer 2:CTGGAGCGGTCATCTAGCAG