Insertion junction: CLIP2.075220_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075220
Chromosome:chromosome 12
Location:2534292
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g507000 FFT6 putative fructan fructosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCCGCCGCCGCCTCCACACCCAAAGAGCCGCCGGCTGGCCCCCTG
Internal bar code:GAGCTAGTCTCCTACGTCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCAAGGTGAATGTGC
Suggested primer 2:CAGGAATGTGCACACTTGGC