Insertion junction: CLIP2.075223_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075223
Chromosome:chromosome 16
Location:3765580
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g685217 NUP58 Nucleoporin 58; (1 of 1) K14307 - nucleoporin p58/p45 (NUPL1, NUP49) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAAGCGTTGAGGTGCACGGGCGCGCCTTGGCTGCGGCAGGTGCGGG
Internal bar code:GAAGGAGTTTATGGAATCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGTACGTGGCCAGTTTC
Suggested primer 2:ATGCCTGACAGGGGTAGGAT