Insertion junction: CLIP2.075232_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075232
Chromosome:chromosome 5
Location:3350295
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g232752 COCA1,COA1 (1 of 1) PF08695 - Cytochrome oxidase complex assembly protein 1 (Coa1); Cytochrome oxidase complex assembly protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGAAGGGGAAAAGTAACTCAATCCTAACCCCAAAGAAAACCGGGGCGG
Internal bar code:AGGACAGCGAGTTCTATAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCTCCTGCTCCTCCT
Suggested primer 2:CACTGCAGTTCTGTTTGGGC