Insertion junction: CLIP2.075241_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075241
Chromosome:chromosome 3
Location:2081583
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g156200 (1 of 1) IPR001304//IPR016186//IPR016187 - C-type lectin // C-type lectin-like // C-type lectin fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGCGAGTCCGTACGCAGTTGTTCACTGGGGTTGGATATGCCGATCT
Internal bar code:AATGAAGGTTGATTCCCACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:181
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAATGACACGACGCAGCG
Suggested primer 2:TCCCAAGCGTGCATACAACT