Insertion junction: CLIP2.075262_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075262
Chromosome:chromosome 2
Location:6754458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800254 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACCGCACAGCAGACCAAGGGCATTGCCGCACCAACCCGCTCCGCC
Internal bar code:TGCTGCCTCCTGAAACTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:162
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACAAGGCGGAAGAGGTC
Suggested primer 2:CCGCCCTAACACATTCAGGT