Insertion junction: CLIP2.075273_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075273
Chromosome:chromosome 2
Location:1953144
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g087950 TSM1 Methionyl-tRNA synthetase; (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCGCGACAGGTGGGTGCGGGGAAGGGCAGGGATGGGGGGGGGGGTTT
Internal bar code:GGCCGCTAGAGGTGATCGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:330
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAGGCGCGGGATGAATA
Suggested primer 2:GATTGTGGTGGTGGTGTTGC