Insertion junction: CLIP2.075276_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075276
Chromosome:chromosome 2
Location:7844650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146150 (1 of 4) PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGAGTGAGGCGGCGCGGGTTAGCAGCACAGCGCGGGCAAGTGGCATG
Internal bar code:GGTCGGTTGTTAGGTTGAGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3471
LEAP-Seq percent confirming:78.7879
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCTTCAGAGGTCAACTT
Suggested primer 2:GACAGCTTCCACACCTTCCA