Insertion junction: CLIP2.075279_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075279
Chromosome:chromosome 5
Location:3600547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234300 (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) 5'UTR
Cre05.g800580 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCGCGTGTGAAACCCCCACCGTGGCAGCGTACACTGACGAGCCGTT
Internal bar code:TGCGAAATCCTAACTTTATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2478
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCAGCTGGTGTTACACT
Suggested primer 2:AACGCCCCATTCACCATCAT