Insertion junction: CLIP2.075289_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075289
Chromosome:chromosome 3
Location:6431098
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase intron
Cre03.g193050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGTCGCTTCCCCTCACGGGCGCTGGAGCCTCTGCTTCAGAAAACAA
Internal bar code:CGGAGGTTTGGGTATAGGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGCATGATCACAGCAGC
Suggested primer 2:GATGCTGCACACAAGTTGCA