Insertion junction: CLIP2.075290_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075290
Chromosome:chromosome 10
Location:5225669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456100 FAP142,POC21,AGG3 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Aggregation 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCCGATCCATATGTGCCACAGGGTCTGCGTCAGGGAATGCAGCCGAG
Internal bar code:CCTGCTTGCCCTGTTTCTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3201
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGGCAAAGCGTGATAGC
Suggested primer 2:TGCGCGCGTTCTAATTAAGC