Insertion junction: CLIP2.075300_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075300
Chromosome:chromosome 12
Location:9068361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544550 (1 of 38) IPR000719//IPR002290//IPR011009 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGTGAACACGTTGCAGCTGCGGCACTCCACAGGGACAGAAATCACGA
Internal bar code:TAGACGCGTCGACGCCAGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCAACTCGTGCAGGACA
Suggested primer 2:CACTCTGTGACACGACACGA