Insertion junction: CLIP2.075307_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075307
Chromosome:chromosome 8
Location:3801515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTTGGCTTCATTCCGTGTTACGCCGTCAGCTGCATGAGCCCAGCAGC
Internal bar code:TTTTAAGAGTGGAGCGCAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2023
LEAP-Seq percent confirming:35.0877
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGTACAGCACGGCAACA
Suggested primer 2:GAGTGGCAGTCAGCTGTGAT