Insertion junction: CLIP2.075307_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075307
Chromosome:chromosome 8
Location:3805056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381250 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATACAGTCACACATACATCTTATTAAGAAAAATCAGCAAGGTTTATT
Internal bar code:TGACGGGTGGGCCAGGGGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4546
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGGCAGTCAGCTGTGAT
Suggested primer 2:ATCAGTACAGCACGGCAACA