Insertion junction: CLIP2.075316_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075316
Chromosome:chromosome 1
Location:3189519
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g020305 SDH4 Succinate dehydrogenase subunit D; (1 of 1) IPR007992 - Succinate dehydrogenase [ubiquinone]cytochrome b small subunit, CybS intron
Cre01.g802251 (1 of 2) PF05328 - CybS, succinate dehydrogenase cytochrome B small subunit (CybS) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGTGCCGCAAGCAACGGGCTCCACACTCTTGCGTTGTGGATTATAG
Internal bar code:GTTAACTGAGTCTGGGGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:2.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAATAGCATGCTGGCCGAAC
Suggested primer 2:GCGTACGTGCCCTCATGATA