Insertion junction: CLIP2.075330_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075330
Chromosome:chromosome 6
Location:5203815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g283750 HST1 (1 of 1) K12501 - homogentisate solanesyltransferase (HST); Homogentisate solanesyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTTTTGCGCCAGAACCGGCCAAAAACGTCTACACCTGCGTAGATGCGC
Internal bar code:GGACGCGGGGCAGACGTTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:974
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAATTCCGCTTCCGATGCAC
Suggested primer 2:GTGCAGTGTGTTTGACGGAC