Insertion junction: CLIP2.075335_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075335
Chromosome:chromosome 11
Location:1876902
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467792 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCCAGCGCACAAACGAGTGTTGGGATGAACTTGTACCGCCAATCAGG
Internal bar code:CTACGGCGCGATTTCGTATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:275
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACTCCTTCCCAGGTC
Suggested primer 2:TGGGAACAGGTTGTGGCTTT