Insertion junction: CLIP2.075351_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075351
Chromosome:chromosome 6
Location:2247849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266900 LPA1L Low PSII Accumulation 1 homolog; (1 of 2) PF11998 - Protein of unknown function (DUF3493) (DUF3493) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGAAGCTCGCACGCCTGGCAACCCTTGTTGTGATTCTTAAGCACGA
Internal bar code:ATAAGATTTTGTAATCCCTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4748
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGTGTGAGGTGTCGACG
Suggested primer 2:AACAGCTCACCGGAATGGAG