Insertion junction: CLIP2.075353_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075353
Chromosome:chromosome 3
Location:8434489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g212977 (1 of 1) IPR000104//IPR000197 - Antifreeze protein, type I // Zinc finger, TAZ-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAGTGCGTGAAACTTTGGGGTGTCTGACACCAGACCTCCAAGTGTCA
Internal bar code:CTAGAGCGGTACTGATGAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGATCGGGCACAATGTGA
Suggested primer 2:GTGTTCGTGTGTGTGGAAGC