Insertion junction: CLIP2.075356_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075356
Chromosome:plastome
Location:60679
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802288 rps7,2716973,ChreCp024 30S ribosomal protein S7; (1 of 2) K02992 - small subunit ribosomal protein S7 (RP-S7, MRPS7, rpsG) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCGTTAGCAATGGCAATTTTATGCAGTTCTTCTTTTTTACGAATAG
Internal bar code:CCTTACGGGGGGTATGTGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGTGGCAGTGGTACCGC
Suggested primer 2:AGTTACCGCGCTTAAAGGCT