Insertion junction: CLIP2.075358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075358
Chromosome:chromosome 14
Location:1803751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619550 POA7 (1 of 1) K02727 - 20S proteasome subunit alpha 7 (PSMA3); 20S proteasome alpha subunit G 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTGCGGGAAATTTATCTTTTCTGGCTTTGCGTCCGATACACCCGCCC
Internal bar code:CATGCACATTTGGAATATGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1869
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGATTCCCAGACCCCA
Suggested primer 2:CTGTCTGCCCTCTGCTATCG