Insertion junction: CLIP2.075359_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075359
Chromosome:chromosome 17
Location:1434473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCGTTGAGCTGGGGAACGGGCAATACTGGGAACACTTTTTTGCGCT
Internal bar code:ACTGAGGAGGATAGATCGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3306
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACCGGTGTGAAGTTG
Suggested primer 2:AGTATCAGGTGCAGATGCCG