Insertion junction: CLIP2.075359_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075359
Chromosome:chromosome 17
Location:1434547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706400 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCAGCAAGCACGCGTGGGTGCGGCGCACCTAACACCGTCCTACTGTG
Internal bar code:GTGCTGGATGAAGCCGCCGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2634
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGTATCAGGTGCAGATGCCG
Suggested primer 2:CAAGCACCGGTGTGAAGTTG