Insertion junction: CLIP2.075360_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075360
Chromosome:chromosome 17
Location:3350934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCGCAGGTGTTGCGGGAACAGTTGCGGGAGACACCTGCTGACCCGC
Internal bar code:GTGCGGGTGACTGTTATAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:184
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGTTCCTCGCGCTAGTTT
Suggested primer 2:TCACAGCGCCACTCGTAATT