Insertion junction: CLIP2.075360_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075360
Chromosome:chromosome 17
Location:3350946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722900 (1 of 781) IPR000104 - Antifreeze protein, type I outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCGCAGCATTCGGTCAACTTGAGCCCACACTAGCAATCTAAATCCC
Internal bar code:GTGCGGGTGACTGTTATAAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2408
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TCACAGCGCCACTCGTAATT
Suggested primer 2:ATCGTTCCTCGCGCTAGTTT