Insertion junction: CLIP2.075364_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075364
Chromosome:chromosome 16
Location:5119725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685500 (1 of 2) IPR006652//IPR011043 - Kelch repeat type 1 // Galactose oxidase/kelch, beta-propeller 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAGCTGACGGGCCCTGGCTAGTGCAATTCCGCTCTCCCCTGCCGAAAT
Internal bar code:GTTAAAGTCGGCGGTGGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATACTTCCCGCCCTCT
Suggested primer 2:AGAAGTGACTCGCGCGATAG