Insertion junction: CLIP2.075369_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075369
Chromosome:chromosome 12
Location:4065281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516550 GTR16,BMT1 (1 of 1) 2.4.1.142 - Chitobiosyldiphosphodolichol beta-mannosyltransferase / mannosyltransferase; putative Beta-1%252C4-mannosyltransferase 3'UTR
Cre12.g516600 STK25 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED; Serine/threonine protein kinase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGAAGGGACGACAAAGTGCAAGCCTGCAATGACCGTGCCGTGGCTG
Internal bar code:CATAAATTGGGTTTCGAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4861
LEAP-Seq percent confirming:67.2269
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:119

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTACGCTGCGATTCTG
Suggested primer 2:GCCGCAGAAGGAGATGTACA