Insertion junction: CLIP2.075371_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075371
Chromosome:chromosome 12
Location:9041973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACGCGAAGGCCCAGGAATTCAGATTCGGATTGGAAGCCCTTGTATCCT
Internal bar code:GGGCGGTGTTAAATACTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2106
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTAGTCATTTGAGGCGCG
Suggested primer 2:TTCACCAGCACAGATCGCAT