Insertion junction: CLIP2.075371_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075371
Chromosome:chromosome 12
Location:9041976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544750 (1 of 1) PF13637//PF13857 - Ankyrin repeats (many copies) (Ank_4) // Ankyrin repeats (many copies) (Ank_5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGACTCGGGCAGGAGGCTTGACGACAAACCTGATGTAGCCTATGAAG
Internal bar code:GGGCGGTGTTAAATACTATACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3390
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACCAGCACAGATCGCAT
Suggested primer 2:GCTTAGTCATTTGAGGCGCG