Insertion junction: CLIP2.075381_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075381
Chromosome:chromosome 2
Location:6652689
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g390000 SRH17 SNF2-related DNA/RNA helicase; (1 of 2) K11654 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-] (SMARCA5, SNF2H, ISWI) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCGCAGCATCTGCCTGTTTTGGCACCCAACTCCAACCTCAAGCTTCT
Internal bar code:TTTCGTTGTGTCTGGCGGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTGGTAGTTGGCCGGAAG
Suggested primer 2:TTCAGGGCATCGTCCTTTCC