Insertion junction: CLIP2.075381_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075381
Chromosome:plastome
Location:143710
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802321 psbA,2716987,ChreCp057 (1 of 2) K02703 - photosystem II P680 reaction center D1 protein (psbA); photosystem II protein D1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGTCTAGTAAAAAGTCACGAAAAAGATTTAAAACAAAGTACAAAAAT
Internal bar code:TTGGAGAAGACGGTGCATTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:106
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCGTGCATTACTTCCA
Suggested primer 2:CGCTCGTAAAACAGGTTGTCC