Insertion junction: CLIP2.075401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075401
Chromosome:chromosome 12
Location:3534633
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496450 RRP4 (1 of 1) K03679 - exosome complex component RRP4 (RRP4, EXOSC2); RNA binding component of exosome complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACAGTGCGCATTGGGCTTGGCGCTGGATTAGCATGTGGAGCTGGCCA
Internal bar code:TTGACGCACGTAATGAAAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCTTGGAGTAAGGTGGC
Suggested primer 2:CTCATGCGTCAATGCTGGTG