Insertion junction: CLIP2.075401_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075401
Chromosome:chromosome 12
Location:3534645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g496450 RRP4 (1 of 1) K03679 - exosome complex component RRP4 (RRP4, EXOSC2); RNA binding component of exosome complex 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAGCCCCCAGCGCACCCTTCATCCAGTACGTTGTTCACAGACCTCTG
Internal bar code:CACTGCTAGATCTCTCTACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTCATGCGTCAATGCTGGTG
Suggested primer 2:ATGGCTTGGAGTAAGGTGGC