Insertion junction: CLIP2.075402_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075402
Chromosome:chromosome 8
Location:3838416
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g381550 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCACCTCCACGCGCACGCCCTGCCTGGCCCCCTCCGCCCTCTCTGCC
Internal bar code:CGCCGTCTTTTAAGATAGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGGTGAAGGTGTGAGG
Suggested primer 2:TACTACCCCGCCAACCAGTA