Insertion junction: CLIP2.075410_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075410
Chromosome:chromosome 12
Location:685241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493000 (1 of 1) IPR006153//IPR020846 - Cation/H+ exchanger // Major facilitator superfamily domain 3'UTR
Cre12.g801351 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTCTGAGAACTGCTAGAGCCGCCTCTCATTCCAATCCTAGGCGCATA
Internal bar code:GCTTGGTATGACCTTCGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTAGTGGTTGCAAAGGCG
Suggested primer 2:CACCGAACCTACACGTGACA