Insertion junction: CLIP2.075412_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075412
Chromosome:chromosome 12
Location:4842472
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g523550 UMM11 UbiE/COQ5 methyltransferase family protein; (1 of 1) PTHR10108//PTHR10108:SF752 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACTCGGTCACCCATGCGGCGGCACGGCCTGAAGCTGTGGTGCCGCAT
Internal bar code:GCATTTAGATTACGGACTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACACACAAGCAGACGC
Suggested primer 2:CGGACTGATAGCCCCGTTAC