Insertion junction: CLIP2.075414_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.075414
Chromosome:chromosome 5
Location:2527345
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCAATTAGCTGGCCCATCCACAGCTTTTGGCTCAGGCGACAAC
Internal bar code:ACGCTAGGTATCTCGGCTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGATTGTCTCGCGGAA
Suggested primer 2:GCGGCTTTCGTCAAGTTTGT