Insertion junction: CLIP2.075417_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075417
Chromosome:chromosome 8
Location:4041355
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g382716 (1 of 5) IPR000626//IPR019956//IPR029071 - Ubiquitin domain // Ubiquitin // Ubiquitin-related domain CDS
Cre08.g382750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGGTCGTACACGTCCAGGTCGGAGTGCACGTCCTGCAGCGTGATGGT
Internal bar code:GTACCAACAATCAAGAGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1564
LEAP-Seq percent confirming:35.4839
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGACAGTCTCCCGTTTCACA
Suggested primer 2:CACACAGCACCTCAAGTTGC