Insertion junction: CLIP2.075418_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075418
Chromosome:chromosome 12
Location:8870293
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g546200 RBL5 Rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTGTGTGATTTTGCACATGGCTGTGGATTGCACCGGGACCGTCATGT
Internal bar code:CATCCTGTAACGACATTGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1440
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTTCTGAGACATTGCGT
Suggested primer 2:CCTATACCGGAGTCACGCAC