Insertion junction: CLIP2.075422_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075422
Chromosome:chromosome 13
Location:1606225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACACTGGCTGTGCGGTTGGAGGATCCGCTAGGATCAGAGCGAGCACAC
Internal bar code:TTTTGGGGCAGAGGGAAACATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2420
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCTCGCCCATATCTTG
Suggested primer 2:GTGGTTAGTTGGGGAGAGGC