Insertion junction: CLIP2.075422_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075422
Chromosome:chromosome 13
Location:1606229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTAGCTGCCTAGCGGTGTAGGATCTTGTGTCGCGGCCCCGCGGGAAA
Internal bar code:CAGTGGCAGGCAACGGCGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3083
LEAP-Seq percent confirming:48.2759
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTAGTTGGGGAGAGGC
Suggested primer 2:GTCCCCTCGCCCATATCTTG