Insertion junction: CLIP2.075423_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075423
Chromosome:chromosome 13
Location:1754247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGTATTACTTCGGAAGGCCGGGCAGGCTGGCGTGGGAAGAGGAATCG
Internal bar code:GCCACGCATTGAAGTTCGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:6760
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCACACCACCTGTTGA
Suggested primer 2:TTGTAAGGCCGGGAAACTCC